Information for 5-GCYKGGWTTTTYTYSS (Motif 8)

A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
Reverse Opposite:
A T C G A T G C C T A G C G T A C T G A C G T A C G T A C T G A C T G A G C A T A G T C A T G C G T C A C T G A A C T G A G T C
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.817
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 33.0bp
Average Position of motif in Background74.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS---
-----TTTTTTTTCNNGTN
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCYKGGWTTTTYTYSS
TGCTGTGATTT------
 A C G T A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS
GCAGTGATTT------
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS---
--NNNNTTTTTTTTTNAAC
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS---
---NNANTTTTATTGGNNN
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS
GYCTGGYYTNTGTCA-
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS
------NTTTTATTGG
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS---
---NNAATTTTATTGGNTN
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS
------NTTTTATTGG
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCYKGGWTTTTYTYSS---
---NGANTTTTATGGCTCN
 A C T G A G T C A G C T A C G T A T C G A C T G C G A T A G C T A G C T A C G T A C G T A G C T A C G T A G T C A T C G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T