Information for 8-GCGCCTTTGC (Motif 12)

A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A C G T A C G T A C T A G A C T G A G T C A C T G A G T C
p-value:1e-6
log p-value:-1.436e+01
Information Content per bp:1.952
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif35.7
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets47.4 +/- 25.3bp
Average Position of motif in Background47.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTTTGC
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCTTTGC
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCGCCTTTGC-
GCGCCTGCGCA
 A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCGCCTTTGC-
---CCTTTGTT
 A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCGCCTTTGC-
---CCWTTGTY
 A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGCCTTTGC---
---CCTTTGTTTT
 A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCTTTGC
NNGGCCACGCCTTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCGCCTTTGC
CTGCGCATGCGC
 A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGCCTTTGC
AGCGCGCC-----
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCGCCTTTGC--
GCGCATGCGCAC
 A C T G A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C T G A T G C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C