Information for 13-CGCTAGCTAG (Motif 18)

T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G
Reverse Opposite:
A G T C A C G T C G T A A C T G A G T C C G A T G T C A A C T G A T G C A T C G
p-value:1e-6
log p-value:-1.577e+01
Information Content per bp:1.850
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif41.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets49.8 +/- 25.6bp
Average Position of motif in Background53.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0032.1_Evx2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGCTAGCTAG----
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCTAGCTAG-----
GANGTTAACTAGTTTNN
 A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0098.1_Lhx8/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAGCTAG----
CACCGCTAATTAGNNGN
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGCTAGCTAG
----NGCTN-
 T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGCTAGCTAG----
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCTAGCTAG-
-GTTAACTAGN
 T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CGCTAGCTAG---
ACATGCTACCTAATAC
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PH0034.1_Gbx2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAGCTAG----
AANCGCTAATTAGCNNN
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

PH0097.1_Lhx6_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAGCTAG----
NNNCGCTAATTAGNNGA
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PH0155.1_Prrx2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGCTAGCTAG----
NTTCGCTAATTAGCTNT
 A C G T A C G T A C G T T A G C A T C G A G T C A C G T G C T A A C T G A G T C A C G T T G C A C T A G A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T