Information for 4-AAAACTAAATTTGGCT (Motif 3)

C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T
Reverse Opposite:
C T G A A T C G A T G C G T A C C G T A G T C A C G T A C G A T A C G T G C A T G T C A C T A G C G A T A G C T C G A T C G A T
p-value:1e-19
log p-value:-4.417e+01
Information Content per bp:1.666
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 26.7bp
Average Position of motif in Background45.8 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.59
Offset:10
Orientation:forward strand
Alignment:AAAACTAAATTTGGCT
----------TTGGCA
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT--
---------NTTGGCANN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:12
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT-
------------NGCTN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAAACTAAATTTGGCT
----CCATATATGG--
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T
A C G T A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT-
--NNCTNAATTATGANN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T
A C G T A C G T G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT--
--------NNTTGGCANN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.53
Offset:10
Orientation:forward strand
Alignment:AAAACTAAATTTGGCT--
----------TWGTCTGV
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT--
--AATNTTAAGTGGNTNN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T A C G T
A C G T A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAACTAAATTTGGCT
NNTGTTTATTTTGGCA
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AAAACTAAATTTGGCT--
--AAATTCAAGTGGNTTN
 C G T A G C T A C T G A C G T A A G T C A C G T C G T A C G T A C G T A G A C T A C G T C G A T C A T G A T C G A T G C A G C T A C G T A C G T
A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A