Information for 11-GGCAGCACCAGCTGAC (Motif 18)

A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
Reverse Opposite:
A T C G A C G T A G T C C G T A A C T G G T A C A C G T A C T G A T C G A C G T A T C G A G T C A C G T A T C G A G T C A T G C
p-value:1e-8
log p-value:-1.916e+01
Information Content per bp:1.884
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.5 +/- 15.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCACCAGCTGAC
ADGGYAGYAGCATCT---
 A C G T A C G T A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGCAGCACCAGCTGAC
-----NAHCAGCTGD-
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGCAGCACCAGCTGAC
------ANCAGCTG--
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:4
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GGCAGCACCAGCTGAC
------AACAGCTGAT
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGCAGCACCAGCTGAC
-----CAGCAGCTGN-
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGCAGCACCAGCTGAC---
--NNNNAGCAGCTGCTGAN
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C A C G T A C G T A C G T
A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGCAGCACCAGCTGAC
----NNAGCAGCTGCT
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGCAGCACCAGCTGAC
------AACAGCTG--
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGCAGCACCAGCTGAC
----VNAVCAGCTGGC
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GGCAGCACCAGCTGAC--
------NVCAGCTGBBNN
 A T C G A C T G A T G C C G T A A C T G A T G C C G T A A T G C A G T C C G T A A C T G A G T C A C G T A C T G C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C