Information for 3-TTTTCAAAACCCA (Motif 4)

C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C T G C G T A G T C A C T G A C G T A
p-value:1e-14
log p-value:-3.224e+01
Information Content per bp:1.932
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.9 +/- 34.5bp
Average Position of motif in Background46.1 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTCAAAACCCA
CGGTTTCAAA-----
 A C G T A C G T C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTCAAAACCCA
NATTCAAAT----
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAACCCA
ATTGCACAATA--
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAACCCA
TTTTCCA------
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTTCAAAACCCA-
CGTATCGAAACCAAA
 A C G T C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TTTTCAAAACCCA
ATTTTCCATT----
 A C G T C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCAAAACCCA
SCTGTCARCACC--
 A C G T C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTTCAAAACCCA
VTTRCATAAY---
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTTTCAAAACCCA
ACATCAAAGG---
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTTTCAAAACCCA
-TTGCAACATN--
 C G A T A G C T A C G T C G A T A G T C G T C A C G T A C G T A C G T A G T A C A G T C A G T C C G T A
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T A C G T