Information for 14-AGTGGTGAAG (Motif 22)

C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T G T A C C G T A A G T C A G T C C G T A A G T C C G A T
p-value:1e-7
log p-value:-1.785e+01
Information Content per bp:1.910
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.0 +/- 27.9bp
Average Position of motif in Background49.4 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTGGTGAAG
TAGGTGTGAAG
 A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGTGAAG
NTNNTTAAGTGGTTANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGAAG
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGTGGTGAAG---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGTGGTGAAG
GCTGTGGTTT--
 A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGAAG---
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGAAG---
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGTGAAG
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGTGAAG
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGGTGAAG---
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T C G T A A C T G A C G T C T A G A C T G A C G T C A T G C G T A C G T A A C T G A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T