Information for 11-CAGCTTGCAA (Motif 21)

A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
Reverse Opposite:
G C A T C A G T A T C G T G A C T G C A C T G A A T C G G A T C A G C T T C A G
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.683
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif872.6
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets59.5 +/- 23.3bp
Average Position of motif in Background49.2 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CAGCTTGCAA
NAACAGCTGG---
 A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGCTTGCAA
AAGCTTG---
 A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTTGCAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTTGCAA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTGCAA
DCTCAGCAGG---
 A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGCTTGCAA
NAHCAGCTGD---
 A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGCTTGCAA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CAGCTTGCAA----
----TTGCAACATN
 A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTTGCAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTGCAA
ANCAGCTG----
 A C G T A C G T A G T C T C G A C T A G A T G C G A C T A C G T A C T G T A G C G T C A C G T A
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T