Information for 10-CAGDCTTGGT (Motif 19)

A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T
Reverse Opposite:
G T C A A G T C A G T C C G T A G C T A T C A G G C A T G T A C A G C T A C T G
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.806
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif94.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets55.7 +/- 21.2bp
Average Position of motif in Background54.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGDCTTGGT-
-----TTGGCA
 A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAGDCTTGGT
TNCCATATATGG-
 A C G T A C G T A C G T A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGDCTTGGT---
----NTTGGCANN
 A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAGDCTTGGT-
TTCCATATATGGAA
 A C G T A C G T A C G T A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

POL002.1_INR/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGDCTTGGT
TCAGTCTT---
 A C G T A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGDCTTGGT---
---NNTTGGCANN
 A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAGDCTTGGT
CCATATATGG-
 A C G T A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGDCTTGGT---
---CCWTTGTYYB
 A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CAGDCTTGGT----------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGDCTTGGT
----CTTTGT
 A G T C C T G A A C T G C G T A A G T C C G A T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T