Information for 12-TGTACCTGVCAGC (Motif 17)

A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T C T A G A C G T A G T C C G T A A C T G A C T G A C G T C G T A A G T C G T C A
p-value:1e-9
log p-value:-2.262e+01
Information Content per bp:1.864
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.7 +/- 29.0bp
Average Position of motif in Background36.3 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTGVCAGC
CTGTTCCTGG----
 A C G T A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGTACCTGVCAGC-
----VBTGWCAGCB
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTACCTGVCAGC
RYHYACCTGB----
 A C G T A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGTACCTGVCAGC
-----TTGACAGC
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGTACCTGVCAGC
----CTTGGCAA-
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGTACCTGVCAGC
-NCACCTGTN---
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGTACCTGVCAGC---
----SCTGTCARCACC
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TGTACCTGVCAGC
-----YTGWCADY
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGTACCTGVCAGC
---ARNTGACA--
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TGTACCTGVCAGC
TACACCTGTC---
 A C G T C T A G C G A T G T C A A G T C A G T C A C G T A C T G T G C A A G T C C T G A A C T G A G T C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T