Information for 9-GCAGCTRCAGCCT (Motif 13)

A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
Reverse Opposite:
C T G A T C A G A C T G T A G C A C G T A T C G A G T C T C G A A C T G A T G C A G C T A C T G A T G C
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.750
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif113.6
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets61.2 +/- 25.1bp
Average Position of motif in Background49.3 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTRCAGCCT
AGCAGCTGCTNN--
 A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAGCTRCAGCCT
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTRCAGCCT
CGCAGCTGCG----
 A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGCTRCAGCCT
NCAGCTGCTG---
 A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTRCAGCCT
GACAGCTGCAG---
 A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTRCAGCCT-
AGATGCTRCTRCCHT
 A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTRCAGCCT
NNACAGCTGC-----
 A C G T A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGCTRCAGCCT-
--GGCTCYAKCAYC
 A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTRCAGCCT
AGCAGCTGCT----
 A C G T A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGCTRCAGCCT-
--GGCCACACCCAN
 A T C G G T A C T C G A A T C G A G T C A G C T T C A G A T G C C G T A A T C G T G A C A G T C G A C T A C G T
A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G