Information for 3-GCAGGCTGTTCAGCCA (Motif 12)

A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A T G C A C G T A C T G T C G A G C T A A G T C C T G A A C T G G A T C A G T C C G A T A C T G A G T C
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 24.0bp
Average Position of motif in Background62.2 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCTGTTCAGCCA
GVACAGNMTGTYCTB---
 A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T A C G T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCAGGCTGTTCAGCCA
AGNACAGNCTGTTCTN---
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCTGTTCAGCCA
GRACAGWMTGTYCTB---
 A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GCAGGCTGTTCAGCCA
---GGCVGTTR-----
 A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:GCAGGCTGTTCAGCCA-
---------BCAGACWA
 A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GCAGGCTGTTCAGCCA
----GCTGTG------
 A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GCAGGCTGTTCAGCCA
-CCTGCTGAGH-----
 A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCTGTTCAGCCA
AGNACANNNTGTNCTN---
 A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:9
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----GCAGGCTGTTCAGCCA
AAGAACATWHTGTTC-----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCTGTTCAGCCA
NNTCCTGCTGTGNNN---
 A C G T A C G T A C T G A G T C C G T A A C T G C T A G A G T C A G C T A C T G C A G T A C G T A G T C C G T A A T C G A G T C A G T C C G T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T