Information for 6-TAGTCTAGTTCAC (Motif 10)

A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T A C T G C G T A C T G A A T G C A C G T C G T A A C T G C G T A A G T C C G A T C T G A
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 14.8bp
Average Position of motif in Background59.3 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAGTCTAGTTCAC---
GAAAACTAGTTAACATC
 A C G T A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGTCTAGTTCAC----
ANNNCTAGTTAACNGNN
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAGTCTAGTTCAC
TWGTCTGV-----
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGTCTAGTTCAC
---ACTAGTTAAC
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PB0081.1_Tcf1_1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGTCTAGTTCAC-----
-NNNTTAGTTAACTNANN
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TAGTCTAGTTCAC-----
-NTTTTAGTTAACNNAGN
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

RORA/MA0071.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:TAGTCTAGTTCAC
--ATCAAGGTCA-
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TAGTCTAGTTCAC---
NNGATCTAGAACCTNNN
 A C G T A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TAGTCTAGTTCAC
---TCAAGGTCAN
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TAGTCTAGTTCAC-
---TCAAGGTCATA
 A G C T C G T A A C T G A C G T A G T C A C G T C G T A A T C G A G C T A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A