Information for 4-AATGCACCTG (Motif 6)

C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G
Reverse Opposite:
A G T C C G T A C A T G T C A G G A C T C A T G A T G C G C T A G A C T G C A T
p-value:1e-15
log p-value:-3.488e+01
Information Content per bp:1.662
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif8.01%
Number of Background Sequences with motif1209.0
Percentage of Background Sequences with motif2.58%
Average Position of motif in Targets55.4 +/- 27.1bp
Average Position of motif in Background50.3 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ID4/MA0824.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AATGCACCTG--
--TACACCTGTC
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF4/MA0830.1/Jaspar

Match Rank:2
Score:0.79
Offset:2
Orientation:forward strand
Alignment:AATGCACCTG--
--CGCACCTGCT
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AATGCACCTG-----
NNTNCGCACCTGTNGAN
 A C G T A C G T C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:AATGCACCTG--
--AACACCTGCT
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:AATGCACCTG--
---NCACCTGTN
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AATGCACCTG--
--NNCACCTGNN
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AATGCACCTG---
-SNGCACCTGCHS
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T A C G T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AATGCACCTG-
-RYHYACCTGB
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AATGCACCTG--
--ACCACCTGTT
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AATGCACCTG----
--NVCAGCTGBBNN
 C G T A C T G A C G A T T A C G G T A C C G T A A G T C G T A C G C A T T C A G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C