Information for 13-CCAGCCACGCGCTGCT (Motif 29)

A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G T A A C T G A G T C A T C G A G T C A C T G A C G T A C T G A C T G G T A C A G C T A C T G A C T G
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.910
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 23.3bp
Average Position of motif in Background30.4 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGCCACGCGCTGCT
---GGCACGCGTC---
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAGCCACGCGCTGCT
YCCGCCCACGCN-----
 A C G T A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCAGCCACGCGCTGCT-
--GACCACGCCCTTATT
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCAGCCACGCGCTGCT
--GGCCACRCCCMK--
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCAGCCACGCGCTGCT
---GCCACGTG-----
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MAX::MYC/MA0059.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCAGCCACGCGCTGCT
---ACCACGTGCTC--
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCAGCCACGCGCTGCT
GGACCACCCACG-------
 A C G T A C G T A C G T A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCAGCCACGCGCTGCT
-----CACGCA-----
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCAGCCACGCGCTGCT
---NCCACGTG-----
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCAGCCACGCGCTGCT
---GGCACGTGCC---
 A G T C A G T C C T G A A C T G G T A C G T A C C G T A A G T C C T A G A T G C A C T G T G A C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T A C G T