Information for 6-GGAAACCACA (Motif 5)

T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A
Reverse Opposite:
A C G T T A C G A C G T A C T G T C A G G A C T A G C T A C G T G A T C A G T C
p-value:1e-13
log p-value:-3.104e+01
Information Content per bp:1.649
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif12.05%
Number of Background Sequences with motif2561.6
Percentage of Background Sequences with motif5.43%
Average Position of motif in Targets53.5 +/- 24.3bp
Average Position of motif in Background49.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.87
Offset:2
Orientation:forward strand
Alignment:GGAAACCACA--
--AAACCACANN
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GGAAACCACA-
-NAAACCACAG
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:GGAAACCACA---
--AAACCACAGAN
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GGAAACCACA--
--AAACCACAGC
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGAAACCACA---
-NWAACCACADNN
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GGAAACCACA--
--AAACCGCAAA
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GGAAACCACA-
--AAACCGCAA
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGAAACCACA
TCCAATCCACA
 A C G T T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGAAACCACA
ACTGAAACCA--
 A C G T A C G T T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAACCACA--
SSAATCCACANN
 T C A G C T A G T G C A T C G A C T G A A G T C T G A C T G C A A T G C T G C A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C