Motif 16

Information for 12-CGCCGCAGCG (Motif 16)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.596e+01
Information Content per bp:	1.619
Number of Target Sequences with motif	24.0
Percentage of Target Sequences with motif	2.73%
Number of Background Sequences with motif	354.5
Percentage of Background Sequences with motif	0.75%
Average Position of motif in Targets	48.3 +/- 20.7bp
Average Position of motif in Background	49.4 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)	0.6
Multiplicity (# of sites on avg that occur together)	1.04
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:	1
Score:	0.60
Offset:	-2
Orientation:	forward strand
Alignment:	--CGCCGCAGCG-- TCCGCCCCCGCATT

POL009.1_DCE_S_II/Jaspar

Match Rank:	2
Score:	0.59
Offset:	3
Orientation:	reverse strand
Alignment:	CGCCGCAGCG ---CACAGN-

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:	3
Score:	0.59
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCCGCAGCG--- NTNGCCTCAGGCNNN

PB0113.1_E2F3_2/Jaspar

Match Rank:	4
Score:	0.58
Offset:	-4
Orientation:	forward strand
Alignment:	----CGCCGCAGCG--- AGCTCGGCGCCAAAAGC

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:	5
Score:	0.58
Offset:	1
Orientation:	reverse strand
Alignment:	CGCCGCAGCG--- -GCCTCAGGGCAT

PB0112.1_E2F2_2/Jaspar

Match Rank:	6
Score:	0.58
Offset:	-4
Orientation:	forward strand
Alignment:	----CGCCGCAGCG--- CCTTCGGCGCCAAAAGG

TFAP2A/MA0003.3/Jaspar

Match Rank:	7
Score:	0.57
Offset:	0
Orientation:	forward strand
Alignment:	CGCCGCAGCG- CGCCTCAGGCA

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:	8
Score:	0.57
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCCGCAGCG--- NTCGCCTCAGGCAAT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:	9
Score:	0.57
Offset:	-2
Orientation:	reverse strand
Alignment:	--CGCCGCAGCG--- NTCCCCTCAGGGANT

POL006.1_BREu/Jaspar

Match Rank:	10
Score:	0.57
Offset:	-4
Orientation:	forward strand
Alignment:	----CGCCGCAGCG AGCGCGCC------