Information for 5-AATCAYAGCC (Motif 19)

G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
Reverse Opposite:
A C T G A T C G A G T C A C G T C T G A A G C T A C T G G T C A A C G T A C G T
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.742
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif622.6
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets52.4 +/- 28.1bp
Average Position of motif in Background52.2 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AATCAYAGCC
AAATCACAGCA
 A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AATCAYAGCC
AAATCACTGC-
 A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATCAYAGCC
CAAATCACTG--
 A C G T A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATCAYAGCC
AAACCACAGC-
 A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AATCAYAGCC
NAAACCACAG--
 A C G T A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATCAYAGCC
AAACCACAGAN
 A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATCAYAGCC
AAACCACANN-
 A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATCAYAGCC
NWAACCACADNN
 A C G T A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AATCAYAGCC---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AATCAYAGCC
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A C G T A G T C T C G A A G C T C G T A C T A G A T G C G T A C
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A