Information for 1-TGTGGTTTCC (Motif 1)

C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
Reverse Opposite:
A T C G A C T G G C T A G C T A G T C A A T G C A G T C T C G A T G A C G C T A
p-value:1e-16
log p-value:-3.700e+01
Information Content per bp:1.676
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif974.0
Percentage of Background Sequences with motif2.05%
Average Position of motif in Targets52.6 +/- 25.6bp
Average Position of motif in Background50.6 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTCC
NNTGTGGTTT--
 A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTCC
CTGTGGTTTN-
 A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTCC
GTCTGTGGTTT--
 A C G T A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTCC
GCTGTGGTTT--
 A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTCC
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTCC
TTTGCGGTTT--
 A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTCC
TTGCGGTTT--
 A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTCC-
TGTGGATTNNN
 C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTCC
NNTGTGGATTSS
 A C G T A C G T C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGTGGTTTCC--
--TGGTTTCAGT
 C G A T A C T G A G C T C T A G T A C G C A G T C G A T C G A T T G A C T A G C A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T