Information for 4-GGCCGCGTGC (Motif 5)

C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C
Reverse Opposite:
C T A G G T A C C G T A A G T C A T C G T G A C A C T G T C A G A T G C G A T C
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.851
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif128.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets52.9 +/- 23.2bp
Average Position of motif in Background50.3 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hes1/MA1099.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GGCCGCGTGC-
-NNCGCGTGNN
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T
A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GGCCGCGTGC
---TGCGTG-
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

HEY2/MA0649.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGCCGCGTGC-
-GACACGTGCC
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGCCGCGTGC---
NNGTCGCGTGNCAC
 A C G T C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGCCGCGTGC--
--TTGCGTGCVA
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGCCGCGTGC
--GGACGTGC
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Tcfl5/MA0632.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCCGCGTGC-
-GGCACGTGCC
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T
A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCCGCGTGC
-NCCACGTG-
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGCCGCGTGC-----
GGGCCGTGTGCAAAAA
 A C G T C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGCCGCGTGC-
-GGCACGTGTC
 C T A G A T C G A G T C T G A C A C T G A T G C A C T G A C G T A C T G A G T C A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C