Information for 14-ACGTACAAGCAAC (Motif 19)

C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T C G A T C T A G A G T C C G A T C G A T A C T G A C G T C T G A T A G C A T C G A C G T
p-value:1e-8
log p-value:-1.877e+01
Information Content per bp:1.884
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 21.9bp
Average Position of motif in Background30.7 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACGTACAAGCAAC--
---SCCTAGCAACAG
 C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACGTACAAGCAAC---
-CCGCATAGCAACGGA
 C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACGTACAAGCAAC---
-TACCATAGCAACGGT
 C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Gmeb1/MA0615.1/Jaspar

Match Rank:4
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ACGTACAAGCAAC
NNNTNGTACGTAANNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T A C G T A C G T

PB0027.1_Gmeb1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ACGTACAAGCAAC
NNNTNGTACGTAANNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGTACAAGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

EGR3/MA0732.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACGTACAAGCAAC
CTACGCCCACGCACT
 A C G T A C G T C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACGTACAAGCAAC
ACGCCCACGCA--
 C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACGTACAAGCAAC-
TGTTKCCTAGCAACM
 A C G T C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGTACAAGCAAC
----CCAATCAA-
 C G T A A T G C A T C G A G C T G T C A A G T C C G T A C G T A A C T G A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T