Information for 6-CAAYACTGCCCCC (Motif 3)

G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C
Reverse Opposite:
C A T G C A T G A C T G A C T G A C T G A T G C C T G A A C T G G A C T C T G A A C G T A C G T A C T G
p-value:1e-21
log p-value:-5.049e+01
Information Content per bp:1.789
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.4 +/- 22.6bp
Average Position of motif in Background48.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CAAYACTGCCCCC-
-----CTGCCCGCA
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAYACTGCCCCC-
NAGCCCCGCCCCCN
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAAYACTGCCCCC-----
----TCCGCCCCCGCATT
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAYACTGCCCCC----
TCACCCCGCCCCAAATT
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAYACTGCCCCC-----
-GGTCCCGCCCCCTTCTC
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAAYACTGCCCCC-
-----ATGCCCACC
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAYACTGCCCCC----
-ATCCCCGCCCCTAAAA
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAAYACTGCCCCC-
------TGACCYCT
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CAAYACTGCCCCC-----
------CGCCCCCTGACA
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAYACTGCCCCC---
--CCCCCGCCCCCGCC
 G T A C G T C A T G C A G A C T C G T A A G T C A G C T A T C G G T A C A G T C G T A C G A T C G T A C A C G T A C G T A C G T
A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C