Information for 9-TTTTTAGTAA (Motif 9)

A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-8
log p-value:-1.921e+01
Information Content per bp:1.970
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 27.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTTAGTAA----
TCTTTANTAATANN
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAGTAA--
NNNTTTNTAATACNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAGTAA--
NNTTTTTCTTATNT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTAGTAA--
GNNATTTGTCGTAANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0001.1_Arid3a_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAGTAA----
NNNTTTTAATTAANNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAGTAA-
NGCTTTCTAGGAAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTTTAGTAA----
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAGTAA---
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTAGTAA
TCTATTTATAGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTTTAGTAA
GCTATTTATAGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T C G T A C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T