Information for 7-SCYAAKAKCAGGC (Motif 8)

A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G G T A C A C G T G T A C A C G T A C G T T C G A A C T G A T G C
p-value:1e-10
log p-value:-2.435e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 23.3bp
Average Position of motif in Background49.5 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:SCYAAKAKCAGGC
-CAAAGGTCAG--
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:SCYAAKAKCAGGC
---AACATCTGGA
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:SCYAAKAKCAGGC--
---CACAGCAGGGGG
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:SCYAAKAKCAGGC---------
--------CAGGCCNNGGCCNN
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:SCYAAKAKCAGGC--
CCACACAGCAGGAGA
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--SCYAAKAKCAGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--SCYAAKAKCAGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:SCYAAKAKCAGGC--
-------CNAGGCCT
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:SCYAAKAKCAGGC-
--------CACGCA
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:SCYAAKAKCAGGC
--NAACAGCTGG-
 A T C G A G T C A G C T G T C A C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T