Information for 4-GCTCTGACCT (Motif 13)

A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T
Reverse Opposite:
C G T A C T A G A T C G A G C T A G T C C G T A C A T G C T G A C T A G A G T C
p-value:1e-8
log p-value:-1.985e+01
Information Content per bp:1.828
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif412.3
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets50.7 +/- 24.7bp
Average Position of motif in Background52.0 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:GCTCTGACCT--
----TGACCTYA
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCTCTGACCT
----TGACCT
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCTCTGACCT----
----TGACCTTGAT
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GCTCTGACCT---
---CTGACCTTTG
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCTCTGACCT-
---GTGACCTT
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GCTCTGACCT--
----TGACCYCT
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GCTCTGACCT---
---NTGACCTTGA
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTGACCT-
TGACCTTTGACCTC
 A C G T A C G T A C G T A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCTCTGACCT--
TGACCTCTGACCCCN
 A C G T A C G T A C G T A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTCTGACCT---
---ATGACCTTGA
 A C T G A G T C G A C T G T A C A C G T C T A G T C G A T A G C G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A