Information for 7-GTCTTACATC (Motif 7)

A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A C G T C G T A C G T A A T C G C T G A A T G C
p-value:1e-10
log p-value:-2.329e+01
Information Content per bp:1.853
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif36.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets47.8 +/- 26.5bp
Average Position of motif in Background50.5 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTCTTACATC--
--ATTGCATCAT
 A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTCTTACATC--
--ATTGCATCAK
 A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTACATC-
TGTCTGDCACCT
 A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTTACATC-
GGCCATAAATCA
 A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTTACATC-
CTGTCTGTCACCT
 A C G T A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTACATC-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTACATC-----
TCNNTTTACAGCGNNNT
 A C G T A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCTTACATC--
GGCCATAAATCAC
 A C G T A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCTTACATC--------
-TCACCCATCAATAAACA
 A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCTTACATC--
GYCATCMATCAT
 A T C G G A C T A T G C C G A T G C A T G T C A G T A C C G T A A C G T A G T C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T