Information for 8-GCTGTGTCCATGA (Motif 14)

C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A C T G C T G A A G T C C G T A A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.810e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 30.5bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0158.1_Rfx3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCTGTGTCCATGA------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTGTGTCCATGA
GCTGTG-------
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTGTGTCCATGA--
NNNGTAACTANGNNA
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCTGTGTCCATGA-
----TGACCTTGAV
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCTGTGTCCATGA-
----TGACCTTGAN
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGTCCATGA--
GGGTGTGCCCAAAAGG
 A C G T C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTGTGTCCATGA--
NTNNCGTATCCAAGTNN
 A C G T A C G T C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGTGTCCATGA
--BNTGDCCTTG-
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCTGTGTCCATGA---
----TGACCTTGACCT
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GCTGTGTCCATGA-
--------CATGAC
 C T A G A G T C A C G T A C T G A C G T C T A G A G C T A G T C A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C