Information for 7-GGGAGSASCCWGT (Motif 12)

A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
Reverse Opposite:
G T C A A T G C G C T A A C T G A C T G A T G C A C G T A T G C A G T C A C G T A T G C A G T C A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.808
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets53.6 +/- 27.2bp
Average Position of motif in Background53.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGGAGSASCCWGT
GGGAGGACNG---
 A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGAGSASCCWGT
ADGGYAGYAGCATCT
 A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGGAGSASCCWGT
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGAGSASCCWGT
-GGACCACCCACG
 A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGSASCCWGT--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGGAGSASCCWGT
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGSASCCWGT
NNVDGGGYGGGGCYN--
 A C G T A C G T A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGSASCCWGT
GGGGGCGGGGCC---
 A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGSASCCWGT
GGGGNGGGGC----
 A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGSASCCWGT
GGGGGCGGGGC----
 A C G T A C G T A C T G C T A G A T C G C G T A A C T G A T C G C G T A A T C G A G T C A G T C C G A T A T C G A C G T
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T