Information for 9-ACATGCGGAG (Motif 11)

G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C G T A C C T A G A G T C T C G A A C G T A C T G A C G T
p-value:1e-8
log p-value:-2.040e+01
Information Content per bp:1.869
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif125.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets50.5 +/- 25.0bp
Average Position of motif in Background51.1 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACATGCGGAG-
-CCTGCTGAGH
 G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCGGAG---
TCNCCTGCTGNGNNN
 A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCGGAG---
NNTCCTGCTGTGNNN
 A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ACATGCGGAG-
-----CGGAGC
 G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCGGAG---
TNTCCTGCTGTGNNG
 A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACATGCGGAG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCGGAG
CCCCCTGCTGTG
 A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------ACATGCGGAG------
TGTCATTACACGTGGAAGGCGGT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCGGAG
GCGCATGCGCAG
 A C G T A C G T G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACATGCGGAG
---TGGGGA-
 G T C A A G T C G T C A A G C T A C T G G A T C A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T