Information for 7-AACTGGATTT (Motif 7)

C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
Reverse Opposite:
C G T A G T C A G C T A A C G T G A T C G T A C C G T A T C A G A C G T A G C T
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.708
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif6.62%
Number of Background Sequences with motif1322.3
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets55.0 +/- 27.3bp
Average Position of motif in Background49.7 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AACTGGATTT
NAAACCGGTTTT
 A C G T A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AACTGGATTT
AAACCGGTTT-
 A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACTGGATTT
NTAATBNAATTA
 A C G T A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTGGATTT
TAATTAAATTA
 A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTGGATTT
TAATTAAATTA
 A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTGGATTT
TAATTAAATTA
 A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACTGGATTT
YTAATYNRATTA
 A C G T A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACTGGATTT---
TTGAATGAAATTCGA
 A C G T A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACTGGATTT
GGTCTGGCAT-
 A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AACTGGATTT-
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T A C G T A C G T C T G A T G C A A G T C C G A T A C T G C T A G T G C A C G A T A C G T C G A T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T