Information for 5-TTGCTGYTGAGCCTYA (Motif 6)

A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
Reverse Opposite:
A G C T C T G A G T C A A C T G A C T G A G T C A C G T T A G C G T C A C T G A A T G C C T G A A T C G G T A C G T C A C T G A
p-value:1e-9
log p-value:-2.098e+01
Information Content per bp:1.749
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.4 +/- 23.4bp
Average Position of motif in Background43.7 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TTGCTGYTGAGCCTYA
-GYCTGGYYTNTGTCA
 A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:2
Score:0.48
Offset:3
Orientation:forward strand
Alignment:TTGCTGYTGAGCCTYA
---HTGCTGAGTCAT-
 A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
A C G T A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-TTGCTGYTGAGCCTYA
CCCCCTGCTGTG-----
 A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:4
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGYTGAGCCTYA
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:5
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGYTGAGCCTYA
AAGACGCTGTAAAGCGA--
 A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGYTGAGCCTYA
AGGACGCTGTAAAGGGA--
 A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--TTGCTGYTGAGCCTYA
ACTTCCTGTT--------
 A C G T A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:TTGCTGYTGAGCCTYA
--------NGGGATTA
 A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.47
Offset:1
Orientation:forward strand
Alignment:TTGCTGYTGAGCCTYA
-TCCTGTTTACA----
 A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A A C G T A C G T A C G T A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------TTGCTGYTGAGCCTYA
TTTTTTTTTTTTTTCAGGTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G C T A T C G A G C T A C G T A C T G C G T A A C T G T A G C T G A C A C G T A G C T C T G A
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T A C G T A C G T