Information for 9-TTTGAAGTAC (Motif 11)

A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
Reverse Opposite:
T C A G C A G T T G C A G T A C A C G T G A C T A G T C G T C A C G T A C T G A
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.833
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif111.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets51.1 +/- 24.1bp
Average Position of motif in Background53.6 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAGTAC
CCTTTGAWGT--
 A C G T A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTTGAAGTAC
CCTTTGATGT--
 A C G T A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTTGAAGTAC-------
TTTTAAGTACTTAAATT
 A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTGAAGTAC-------
TTCNAAGTACTTNNNNN
 A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTGAAGTAC------
NATTTAAGTACTTANNA
 A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAGTAC
TNCCTTTGATGT--
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTTGAAGTAC
ATTTGAATT--
 A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTGAAGTAC
TNCCTTTGATCTTN
 A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTGAAGTAC------
CTTTAAGTACTTAATG
 A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TTTGAAGTAC-
NNTTCCTTTGATCTANA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C T G C G T A C G T A A C T G A C G T G T C A A G T C A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A