Information for 5-TTMATAASTG (Motif 6)

A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G
Reverse Opposite:
G T A C C G T A A T C G A C G T G C A T C G T A A G C T A C G T C G T A C T G A
p-value:1e-10
log p-value:-2.334e+01
Information Content per bp:1.759
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif254.6
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets54.5 +/- 28.8bp
Average Position of motif in Background50.8 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0120.1_Nkx6-3/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TTMATAASTG--
GAAAATTAATTACTTTG
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0159.1_Rhox6/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TTMATAASTG---
TGCCTTAATTAATGCTC
 A C G T A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T A C G T
C G A T T C A G G T A C T G A C G A C T G A C T G C T A T C G A A C G T C G A T C G T A C T G A A G C T A C T G A T G C C G A T G A T C

PH0175.1_Vax2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTMATAASTG---
GNCTTAATTAGTGNNN
 A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T A C G T
A C T G A G C T T G A C A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T T A C G A G T C G C T A T G A C

PH0028.1_En1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTMATAASTG---
GNATTAATTAGTTNNC
 A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

MEOX2/MA0706.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTMATAASTG
NTTAATTACN-
 A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTMATAASTG---
GTAGTAATTAATGCAA
 A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

POU6F1/MA0628.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTMATAASTG
ATTAATTAAT-
 A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G
T C G A G A C T G C A T G T C A G T C A A C G T C A G T C G T A C T G A A G C T A C G T

PH0019.1_Dbx2/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTMATAASTG---
NAATTAATTAATTNNN
 A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

MNX1/MA0707.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTMATAASTG
TTTAATTANN-
 A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T

PH0093.1_Lhx3/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTMATAASTG--
NNTATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G C A C T G A A C G T C G T A C G T A T A G C A C G T A C T G A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C