Information for 4-TGCTGCCACC (Motif 2)

C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C
Reverse Opposite:
C T A G T A C G C A G T A T C G C T A G A G T C C T G A A C T G G A T C G T C A
p-value:1e-39
log p-value:-8.985e+01
Information Content per bp:1.838
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif494.2
Percentage of Background Sequences with motif1.03%
Average Position of motif in Targets45.9 +/- 19.0bp
Average Position of motif in Background50.1 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC-
--ATGCCAACC
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCCACC-----
ACTATGCCAACCTACC
 A C G T C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCTGCCACC
VGCTGWCAVB
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCTGCCACC-
---TGACACCT
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCCACC--
AGATGCTRCTRCCHT
 A C G T A C G T A C G T C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCTGCCACC
--TTGCCAAG
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTGCCACC---
-GCGACCACCGAA
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T A C G T A C G T
A C G T C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCTGCCACC
TGCTGACTCA
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCTGCCACC
-CGTGCCAAG
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCTGCCACC--
-GCTGTTACCCT
 C A G T C T A G T G A C A G C T A C T G A G T C A T G C G T C A A T G C A G T C A C G T A C G T
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T