Information for 6-CAGGAGTTCA (Motif 6)

T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A
Reverse Opposite:
C G A T T A C G T C G A T G C A G T A C A C G T G T A C G T A C A G C T A C T G
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.680
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif10.34%
Number of Background Sequences with motif2050.9
Percentage of Background Sequences with motif4.28%
Average Position of motif in Targets49.6 +/- 26.4bp
Average Position of motif in Background49.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGGAGTTCA
--AGRGGTCA
 T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGGAGTTCA
--TRAGGTCA
 T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGGAGTTCA---
-ATGACGTCATCN
 T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T A C G T A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGAGTTCA-
---AAGGTCAC
 T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGGAGTTCA---
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGAGTTCA
ANCAGGATGT--
 A C G T A C G T T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGGAGTTCA-
AAGGTCAAAAGGTCAA
 A C G T A C G T A C G T A C G T A C G T T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGGAGTTCA--
AAAGATGATGTCATC
 A C G T A C G T A C G T T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAGGAGTTCA
GAGGTCAAAAGGTCA
 A C G T A C G T A C G T A C G T A C G T T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

JunD(bZIP)/K562-JunD-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGAGTTCA---
-ATGACGTCATCN
 T G A C C T G A C A T G C A T G T G C A C A T G A C G T A G C T A T G C G C T A A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A G T C T C A G A G C T G T A C C G T A A G C T G A T C T C G A