Information for 10-GTCTTAAAAG (Motif 10)

A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
Reverse Opposite:
G T A C A C G T A C G T A C G T A C G T C G T A G C T A A T C G C G T A A T G C
p-value:1e-11
log p-value:-2.625e+01
Information Content per bp:1.770
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif238.3
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets58.2 +/- 21.6bp
Average Position of motif in Background47.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTCTTAAAAG
GTCGTAAAAT
 A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GTCTTAAAAG
GGTCGTAAAAA
 A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTCTTAAAAG-
GGTCGTAAAATT
 A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTCTTAAAAG
GTCGTAAAAA
 A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCTTAAAAG---
TAAGGTCGTAAAATCCT
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCTTAAAAG---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCTTAAAAG--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GTCTTAAAAG--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTCTTAAAAG
GGTCGTAAAAT
 A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCTTAAAAG
AGTCGTAAAAA
 A C G T A T C G A C G T A T G C C G A T C G A T C G T A C G T A G T C A C G T A A C T G
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A