Information for 2-TCTACAATCACAVCHB (Motif 4)

A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
Reverse Opposite:
T C G A C A G T A C T G A C T G A C G T A C T G A C G T A T C G C G T A A C G T A C G T A C T G A C G T C T G A C T A G C G T A
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.8 +/- 23.7bp
Average Position of motif in Background34.0 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCTACAATCACAVCHB
---CCAATCAA-----
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCTACAATCACAVCHB
----AAATCACTGC--
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCTACAATCACAVCHB
----AAATCACAGCA-
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTACAATCACAVCHB
CAAACAACAACACCT-
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TCTACAATCACAVCHB
---CAAATCACTG---
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTACAATCACAVCHB
--GACAATGNN-----
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTACAATCACAVCHB
GTAAACAAT--------
 A C G T A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TCTACAATCACAVCHB
-------TCACACCT-
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TCTACAATCACAVCHB
------ATCACCCCAT
 A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTACAATCACAVCHB
NNNTAACAATTATAN---
 A C G T A C G T A C G T A G T C A G C T C G T A A G T C G T C A C G T A A C G T A T G C C G T A A G T C G T C A T A G C T G A C G C T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G A C G T A C G T A C G T