Information for 16-YTCAKGACMKTGG (Motif 16)

A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A G T C A A C T G C T A G A C G T A T G C G T A C A C G T A C T G C G T A T C G A
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.843
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.4 +/- 17.6bp
Average Position of motif in Background61.2 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:YTCAKGACMKTGG--------
TTCAGCACCATGGACAGCGCC
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-YTCAKGACMKTGG---
NNNNATGACCTTGANTN
 A C G T A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YTCAKGACMKTGG--------
-TCAGCACCATGGACAGCTCC
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Esrra/MA0592.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YTCAKGACMKTGG-
---ATGACCTTGAA
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YTCAKGACMKTGG
---ATGACCTTGA
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:YTCAKGACMKTGG-
----TGACCTTGAV
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YTCAKGACMKTGG
--NATGACCTTGA
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:YTCAKGACMKTGG-
----TGACCTTGAN
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YTCAKGACMKTGG
--BNTGDCCTTG-
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YTCAKGACMKTGG
---NTGACCTTGA
 A G C T A C G T A G T C C G T A A C T G A T C G G T C A A G T C G T A C C A G T C G A T A C T G A C T G
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A