Information for 12-AAGGCCGTTA (Motif 13)

C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A
Reverse Opposite:
C G A T G T C A C G T A T G A C A C T G A C T G A G T C A G T C G A C T A C G T
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.859
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.6 +/- 23.6bp
Average Position of motif in Background50.0 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:AAGGCCGTTA
--GGCVGTTR
 C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AAGGCCGTTA-
-BRRCVGTTDN
 C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T
A C G T A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGGCCGTTA-
-TGGCAGTTGG
 C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCCGTTA----
NNNTGGCAGTTGGTNN
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGGCCGTTA-
-TGGCAGTTGN
 C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T
A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

PB0046.1_Mybl1_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCGTTA----
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCGTTA
CTAGGCCT---
 A C G T C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCCGTTA----
CACGGCAGTTGGTNN
 A C G T C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGCCGTTA
-TGTCGGTT-
 C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A
A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGGCCGTTA----
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T C G T A C G T A A C T G A C T G A G T C G T A C A C T G A C G T A C G T G C T A A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T