Information for 11-CCTTTTGACC (Motif 12)

A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C
Reverse Opposite:
A C T G C A T G A G C T A G T C C G T A C G T A G T C A C T G A A C T G A T C G
p-value:1e-8
log p-value:-2.005e+01
Information Content per bp:1.850
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif113.3
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.1 +/- 22.4bp
Average Position of motif in Background52.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTTGACC--
TTGACCTTTTGACCTT
 A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTGACC---
TGACCTTTTGACCTTT
 A C G T A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTGACC--
TGACCTTTTGACCTC
 A C G T A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

RARA/MA0729.1/Jaspar

Match Rank:4
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------CCTTTTGACC--
CATTGACCTTTTGACCTC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTTTTGACC----
-CNNTTGACCTTTG
 A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0040.1_Lef1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCTTTTGACC----
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTGACC--
TGACCTTTGACCCC
 A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTGACC--
TGACCTTTGACCTN
 A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRB/MA0855.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTGACC--
TGACCTTTGACCCC
 A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTGACC--
TGACCTTTGACCCC
 A C G T A C G T A T G C A G T C A G C T A C G T A C G T C G A T C T A G T C G A G T A C G T A C A C G T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C