Information for 1-NTGACCTCAB (Motif 1)

G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
Reverse Opposite:
T G A C G C A T T C A G C T G A A C T G A C T G C G A T A G T C C G T A C A G T
p-value:1e-60
log p-value:-1.383e+02
Information Content per bp:1.666
Number of Target Sequences with motif239.0
Percentage of Target Sequences with motif29.36%
Number of Background Sequences with motif4371.5
Percentage of Background Sequences with motif9.09%
Average Position of motif in Targets50.4 +/- 24.8bp
Average Position of motif in Background50.3 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NTGACCTCAB
-TGACCTYA-
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NTGACCTCAB
-TGACCYCT-
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:NTGACCTCAB
-TGACCT---
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:4
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---NTGACCTCAB
CNNTTGACCTTTG
 A C G T A C G T A C G T G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.87
Offset:-4
Orientation:forward strand
Alignment:----NTGACCTCAB---
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:NTGACCTCAB
GTGACCTT--
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.85
Offset:-3
Orientation:reverse strand
Alignment:---NTGACCTCAB---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:NTGACCTCAB
CTGACCTTTG
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:NTGACCTCAB-
-TGACCTTGAT
 G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---NTGACCTCAB---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T G T C A A C G T C T A G C G T A G T A C A G T C A G C T A G T C C G T A A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A