Information for 6-CCCTGGTGGCCADCAG (Motif 20)

A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
Reverse Opposite:
A T G C C G A T A C T G G T A C A C G T A C T G A C T G A G T C A G T C C G T A A G T C A T G C C T G A A C T G C A T G A T C G
p-value:1e-7
log p-value:-1.656e+01
Information Content per bp:1.769
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 21.8bp
Average Position of motif in Background72.2 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CCCTGGTGGCCADCAG
TAGCGCCCCCTGGTGGCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCCTGGTGGCCADCAG
-------TGCCAA---
 A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTGGTGGCCADCAG
-----CGTGCCAAG--
 A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------CCCTGGTGGCCADCAG
ANAGTGCCACCTGGTGGCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGTGGCCADCAG
TGCCCTGAGGGCA-----
 A C G T A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGTGGCCADCAG
TCACCTCTGGGCAG---
 A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCTGGTGGCCADCAG
TGCCCTGAGGGCA-----
 A C G T A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGGTGGCCADCAG
TGCCCNNAGGGCA-----
 A C G T A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCTGGTGGCCADCAG
TGCCCCCGGGCA-----
 A C G T A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.55
Offset:8
Orientation:forward strand
Alignment:CCCTGGTGGCCADCAG--
--------GCCATCTGTT
 A T G C G T A C A G T C A G C T A T C G C T A G G C A T A C T G A C T G A G T C A G T C C G T A C A T G G T A C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T