Information for 1-GACAGCCCAT (Motif 2)

T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T
Reverse Opposite:
C G T A C G A T C T A G C T A G A T C G T A G C A C G T A C T G A C G T A G T C
p-value:1e-14
log p-value:-3.347e+01
Information Content per bp:1.693
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif7.10%
Number of Background Sequences with motif1024.7
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets49.4 +/- 26.0bp
Average Position of motif in Background49.8 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GACAGCCCAT----
NNNTCCATCCCATAANN
 A C G T A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCCCAT-
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGCCCAT
TTGACAGC----
 A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCCCAT-
GTATTGACAGGTNNTT
 A C G T A C G T A C G T A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GACAGCCCAT--
TATCGACCCCCCACAG
 A C G T A C G T A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GACAGCCCAT
TTGACAGG----
 A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACAGCCCAT-
GGACCACCCACG
 A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAGCCCAT
ATCACCCCAT
 T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGCCCAT
TTGACAG-----
 A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGCCCAT-
GTATTGACAGCTNNTT
 A C G T A C G T A C G T A C G T A C G T T C A G T G C A T G A C T G C A A T C G A T G C G A T C G A T C C G T A G C A T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T