Information for 7-CTTTGCAGGA (Motif 16)

A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A
Reverse Opposite:
A G C T A T G C A G T C A C G T T C A G A T G C C G T A T C G A C G T A C T A G
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.849
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif234.3
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets54.8 +/- 23.2bp
Average Position of motif in Background51.1 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGCAGGA--
NGCTTTCTAGGAAN
 A C G T A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTTTGCAGGA--
NNNCTTTCCAGGAAA
 A C G T A C G T A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTTTGCAGGA-----
TCTTTCGAGGAATTTG
 A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:-9
Orientation:forward strand
Alignment:---------CTTTGCAGGA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-9
Orientation:forward strand
Alignment:---------CTTTGCAGGA-
TTTTTTTTTTTTTTCAGGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

STAT1/MA0137.3/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTTGCAGGA--
-TTTCCAGGAAA
 A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T
A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTTGCAGGA--
CACAGCAGGGGG
 A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

BCL6B/MA0731.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTTTGCAGGA-----
TGCTTTCTAGGAATTCA
 A C G T A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGCAGGA----
DCHCAGCAGGRGGCC
 A C G T A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTTTGCAGGA---
-TTTCCNGGAAAN
 A G T C A C G T A G C T A C G T A T C G A G T C C G T A A C T G A T C G C T G A A C G T A C G T A C G T
A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C