Information for 1-WCCACARKWRGCAGAG (Motif 1)

C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
Reverse Opposite:
A G T C A C G T A G T C A C G T A T C G A G T C G A C T C G A T G T A C A G T C A C G T A C T G A C G T A C T G A C T G G C T A
p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.1 +/- 25.1bp
Average Position of motif in Background29.8 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---WCCACARKWRGCAGAG
NWAACCACADNN-------
 A C G T A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WCCACARKWRGCAGAG
NAAACCACAG---------
 A C G T A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--WCCACARKWRGCAGAG
AAACCACAGAN-------
 A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--WCCACARKWRGCAGAG
AAACCACAGC--------
 A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-WCCACARKWRGCAGAG
ATCCAC-----------
 A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--WCCACARKWRGCAGAG
AAACCACANN--------
 A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:WCCACARKWRGCAGAG--
--AACAATGTGCAGTGTT
 C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G A C G T A C G T
A C G T A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WCCACARKWRGCAGAG
--AACAGGAAGT----
 C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WCCACARKWRGCAGAG
AAACCGCAAA--------
 A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--WCCACARKWRGCAGAG
AAACCGCAA---------
 A C G T A C G T C G A T A G T C A G T C C G T A A G T C G T C A C T A G A C T G C G T A C T G A A C T G A T G C C G T A A C T G C G T A T A C G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T