Information for 24-GGTGAACTAGGTA (Motif 26)

A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.810e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 18.2bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTGAACTAGGTA-
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGTGAACTAGGTA-----
-GAAAACTAGTTAACATC
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTGAACTAGGTA
-GTTAACTAGN--
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTGAACTAGGTA--
-TTGACCTANTTATN
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGTGAACTAGGTA--
NNAGGGACAAGGGCNC
 A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGTGAACTAGGTA
--TGACCTARTT-
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGTGAACTAGGTA
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGTGAACTAGGTA
--TGACCTTGAT-
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGTGAACTAGGTA
-CTGACCTTTG--
 A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGTGAACTAGGTA
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C T G A C G T C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A