Information for 5-CACGWCCCTGACCTYM (Motif 15)

G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
Reverse Opposite:
A C G T C T G A C G T A C T A G A C T G C A G T A G T C T C G A A T C G A C T G A C T G G C A T A T G C A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.703
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.55%
Number of Background Sequences with motif47.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets66.5 +/- 24.6bp
Average Position of motif in Background48.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
--TGACCTTGACCT--
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
--------TGACCTYA
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
--TGACCTTGACCT--
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.64
Offset:7
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
-------GTGACCTT-
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
--------TGACCT--
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CACGWCCCTGACCTYM-
-------NTGACCTTGA
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM
--------TGACCYCT
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM-
-------CTGACCTTTG
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM--
--------TGACCTTGAT
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CACGWCCCTGACCTYM-
-------ATGACCTTGA
 G T A C G T C A T G A C T A C G C G T A A G T C G T A C A T G C A G C T C T A G G T C A A G T C A G T C C G A T A G C T T G C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A