Information for 5-GAGCGCCCTC (Motif 6)

T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C
Reverse Opposite:
T A C G T C G A A C T G T C A G C T A G T G A C C T A G T G A C G C A T A T G C
p-value:1e-15
log p-value:-3.520e+01
Information Content per bp:1.666
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif378.0
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets52.1 +/- 20.5bp
Average Position of motif in Background52.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGCCCTC--
NNNGGGGCGCCCCCNN
 A C G T A C G T A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GAGCGCCCTC--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GAGCGCCCTC--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGCGCCCTC-----
GGTCCCGCCCCCTTCTC
 A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

PB0095.1_Zfp161_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAGCGCCCTC--
NCANGCGCGCGCGCCA
 A C G T A C G T A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGCGCCCTC-------
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCGCCCTC---
---CRCCCACGCA
 T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGCGCCCTC-----
-TCCGCCCCCGCATT
 T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCGCCCTC---
-YCCGCCCACGCN
 T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C A C G T A C G T A C G T
A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCGCCCTC
AGCGCGCC---
 A C G T T A C G C G T A A C T G G A T C A C T G A G T C A G T C T G A C A G C T A T G C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T