Information for 13-TGCACACATGTGC (Motif 13)

G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
Reverse Opposite:
T C A G G A T C C G T A A G T C G C T A A G C T C T A G C G A T A C T G A C G T A C T G A G T C C G T A
p-value:1e-10
log p-value:-2.399e+01
Information Content per bp:1.756
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.7 +/- 10.3bp
Average Position of motif in Background51.0 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGCACACATGTGC
--AACACGTGTT-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCACACATGTGC
--NACATATGGN-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCACACATGTGC
--GGCACGTGTC-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCACACATGTGC
-NAACAGCTGT--
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGCACACATGTGC
----CACGTGBN-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGCACACATGTGC
--AACACCTGCT-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGCACACATGTGC
AGCGGCACACACGCAA
 A C G T A C G T A C G T G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCACACATGTGC--
NNTNCGCACCTGTNGAN
 A C G T A C G T G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCACACATGTGC
---ACACGTGC--
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCACACATGTGC
NNACCACGTGGT-
 G C A T T C A G G T A C C G T A A G T C C G T A A G T C T C G A C A G T A C T G A C G T C T A G A G T C
C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A C G T