Information for 4-CAGCGCCCTCTGC (Motif 5)

A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C
Reverse Opposite:
A T C G A T G C C G T A A C T G C T G A A C T G A C T G A C T G G T A C A C T G A G T C A C G T A T C G
p-value:1e-21
log p-value:-4.864e+01
Information Content per bp:1.888
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 19.7bp
Average Position of motif in Background50.2 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAGCGCCCTCTGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAGCGCCCTCTGC------
TAGCGCCCCCTGGTGGCCA
 A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGCGCCCTCTGC--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAGCGCCCTCTGC------
ANAGTGCCACCTGGTGGCCA
 A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGCCCTCTGC
NNNGGGGCGCCCCCNN-
 A C G T A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGCGCCCTCTGC--
---CGCCCCCTGACA
 A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T A C G T
A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGCGCCCTCTGC-
----GCCATCTGTT
 A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGCCCTCTGC
ANCGCGCGCCCTTNN-
 A C G T A C G T A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCCCTCTGC
GCCMCGCCCMCY--
 A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCCCTCTGC
GCTCCGCCCMCY--
 A C G T A T G C C G T A A C T G A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A T C G A T G C
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T